1. Introduction¶
On the supercomputer Fugaku, open-source software packages (OSSs) are managed and provided with a package management tool Spack.
Spack is adopted by the Exascale Computing Project (ECP) in U.S. For more details of Spack, please refer to the following URL:
The current version of Spack on Fugaku is 1.0.1. The previous versions (0.21 and 0.19) are still available.
The list of OSS which can be built on Fugaku by Spack is in the following URL:
https://spack-mirror.r-ccs.riken.jp/oss/public/
Note that the list does not reflect the latest status in the current environment of Fugaku.
The usage explained in this document might be changed.
Any of the OSSs might be replaced because of the upgrade of them or any other reasons.
OSSs on Fugaku are not supported and we cannot accept questions or requests about their usage, problems, etc. in principle. It is users’ responsibility to follow the license of each OSS.
2. Usage of OSSs¶
To use an OSS on a login node, run the commands below on the terminal of it. To use an OSS on a compute node, put the commands in a job script or run them in the terminal of an interactive job.
For more detailed usage of Spack on Fugaku, refer to Spack User’s Guide for Fugaku.
Setup Spack
$ . /vol0004/apps/oss/spack/share/spack/setup-env.sh
List installed packages
The spack find command lists installed packages. In the example
below, the packages in the linux-rhel8-a64fx section is compute nodes, and
linux-rhel7-cascadelake and linux-rhel8-skylake_avx512 for login nodes.
$ spack find ... -- linux-rhel8-a64fx / %c,cxx,fortran=fj@4.12.0 ----------------- adios2@2.9.2 adios2@2.10.2 cp2k@2025.2 fugaku-frontistr@master lammps@20230802.4 libint@2.6.0 ... -- linux-rhel8-cascadelake / %c,cxx,fortran=gcc@15.1.0 ---------- adios2@2.9.2 darshan-util@3.4.0-pre1 openmpi@5.0.8 ... ==> 1046 installed packages
Load a package
The
spack loadcommand activates the specified package.(Example) load openblas:
$ spack load openblas
Unload a package
The
spack unloadcommand deactivates the specified package.(Example) unload openblas:
$ spack unload openblas
3. Current Status¶
The following OSSs are available at October 17th, 2025. We will make more OSSs available on Fugaku. For the status of the previous version 0.21 (0.19), see Spack v0.21 (Spack v0.19.0).
Note: Many other OSSs on which the followings are dependent are also installed.
3.1. Packages installed on the login nodes¶
Name |
Version |
Compiler |
Remark |
boost |
1.88.0 |
gcc@15.1.0 |
|
cmake |
3.31.8 |
gcc@15.1.0 |
|
darshan-util |
3.4.0 |
gcc@15.1.0 |
|
gcc |
14.3.0 |
gcc@8.5.0 |
|
gcc |
15.1.0 |
gcc@8.5.0 |
|
global |
6.6.14 |
||
gnuplot |
6.0.0 |
gcc@15.1.0 |
|
hdf5 |
1.12.2 |
gcc@8.5.0 |
|
hdf5 |
1.14.6 |
gcc@15.1.0 |
|
imagemagick |
7.1.1-39 |
gcc@15.1.0 |
|
libxml2 |
2.13.5 |
gcc@15.1.0 |
|
mercurial |
6.7.3 |
gcc@15.1.0 |
|
nano |
8.0 |
gcc@8.5.0 |
|
netcdf-c |
4.9.2 |
gcc@15.1.0 |
|
netcdf-fortran |
4.6.1 |
gcc@15.1.0 |
|
openfoam |
2412 |
gcc@14.3.0 |
|
openfoam |
2412 |
gcc@15.1.0 |
|
openfoam-org |
12 |
gcc@15.1.0 |
|
openjdk |
17.0.11_9 |
gcc@15.1. |
|
py-mpi4py |
3.1.4 |
gcc@8.5.0 |
|
py-phonopy |
2.27.0 |
||
py-pip |
25.1.1 |
||
py-scipy |
1.11.3 |
gcc@8.5.0 |
|
python |
3.13.5 |
gcc@15.1.0 |
|
screen |
4.9.1 |
gcc@15.1.0 |
|
tmux |
3.5a |
gcc@15.1.0 |
3.2. Packages installed on the compute nodes¶
Name |
Version |
Compiler |
Remark |
adios2 |
2.10.2 |
fj@4.12.0 |
|
akaikkr |
2021v02 |
fj@4.12.0 |
|
alamode |
1.5.0 |
fj@4.12.0 |
|
batchedblas |
1.0 |
fj@4.12.0 |
|
bcftools |
1.21 |
fj@4.12.0 |
|
bedtools2 |
2.31.1 |
fj@4.12.0 |
|
biobambam2 |
2.0.177 |
fj@4.12.0 |
|
blitz |
1.0.2 |
fj@4.12.0 |
|
boost |
1.88.0 |
fj@4.12.0 |
|
bwa |
0.7.17 |
fj@4.12.0 |
|
cbc |
2.10.11 |
fj@4.12.0 |
|
cblas |
2015-06-06 |
fj@4.12.0 |
|
cmake |
3.31.8 |
fj@4.12.0 |
|
cosma |
2.6.6 |
fj@4.12.0 |
|
cp2k |
2025.2 |
fj@4.12.0 |
|
darshan-runtime |
3.4.0 |
fj@4.12.0 |
|
dssp |
3.1.4 |
fj@4.12.0 |
|
eigen |
3.4.0 |
fj@4.12.0 |
|
eigenexa |
2.6 |
fj@4.12.0 |
|
ermod |
0.3.6 |
fj@4.12.0 |
|
fds |
6.9.1 |
fj@4.12.0 |
|
ffb |
9.0 |
fj@4.12.0 |
|
ffmpeg |
6.1.1 |
fj@4.12.0 |
|
ffmpeg |
7.1 |
gcc@8.5.0 |
|
ffvhc-ace |
0.1 |
||
ffx |
03.01 |
fj@4.12.0 |
|
fugaku-frontistr |
master |
fj@4.12.0 |
|
fujitsu-fftw |
1.1.0 |
fj@4.12.0 |
|
fujitsu-mpi |
4.12.0 |
||
fujitsu-ssl2 |
head |
||
gcc |
13.4.0 |
gcc@8.5.0 |
|
gcc |
14.3.0 |
gcc@8.5.0 |
|
gcc |
15.1.0 |
gcc@8.5.0 |
|
gmp |
6.3.0 |
fj@4.12.0 |
|
grads |
2.2.3 |
fj@4.12.0 |
|
gromacs |
2023.5 |
fj@4.12.0 |
|
gromacs |
2024.5 |
fj@4.12.0 |
|
gromacs |
2024.6 |
fj@4.12.0 |
|
gromacs |
2025.3 |
fj@4.12.0 |
|
gsl |
2.8 |
fj@4.12.0 |
|
hdf5 |
1.14.6 |
fj@4.12.0 |
|
hphi |
3.5.1 |
fj@4.12.0 |
|
htslib |
1.21 |
fj@4.12.0 |
|
hwloc |
2.2.0 |
||
improved-rdock |
main |
fj@4.12.0 |
|
kim-api |
2.2.1 |
fj@4.12.0 |
|
lammps |
20220623.2 |
fj@4.12.0 |
|
lammps |
20230802.3 |
fj@4.12.0 |
|
lammps |
20230802.4 |
fj@4.12.0 |
|
lammps |
20240829.2 |
fj@4.12.0 |
|
lammps |
20250722.1 |
fj@4.12.0 |
|
libxc |
7.0.0 |
fj@4.12.0 |
|
lis |
2.1.7 |
fj@4.12.0 |
|
llvm |
17.0.6 |
gcc@8.5.0 |
|
llvm |
18.1.8 |
gcc@8.5.0 |
|
llvm |
19.1.7 |
gcc@8.5.0 |
|
llvm |
20.1.6 |
gcc@8.5.0 |
|
mapsplice2 |
2.2.1 |
fj@4.12.0 |
|
mesa |
25.0.5 |
fj@4.12.0 |
|
modylas-new |
1.1.0 |
fj@4.12.0 |
ff=charmm |
modylas-new |
1.1.0 |
fj@4.12.0 |
ff=gaff |
modylas-new |
1.1.0 |
fj@4.12.0 |
ff=oplsaa |
mptensor |
0.3.0 |
fj@4.12.0 |
|
mvmc |
1.3.0 |
fj@4.12.0 |
|
nano |
8.0 |
gcc@8.5.0 |
|
netcdf-c |
4.9.2 |
fj@4.12.0 |
|
netcdf-cxx |
4.2 |
fj@4.12.0 |
|
netcdf-cxx4 |
4.3.1 |
fj@4.12.0 |
|
netcdf-fortran |
4.6.1 |
fj@4.12.0 |
|
netlib-scalapack |
2.2.2 |
fj@4.12.0 |
|
onednn |
3.0 |
fj@4.12.0 |
|
openbabel |
3.1.1 |
fj@4.12.0 |
|
openblas |
0.3.30 |
fj@4.12.0 |
|
openfoam |
2412 |
fj@4.12.0 |
|
openfoam-org |
12 |
fj@4.12.0 |
|
openjdk |
17.0.11_9 |
fj@4.12.0 |
|
openmx |
3.9.9 |
fj@4.12.0 |
|
parallel-netcdf |
1.14.0 |
fj@4.12.0 |
|
paraview |
5.13.3 |
fj@4.12.0 |
|
parmetis |
4.0.3 |
fj@4.12.0 |
|
petsc |
3.23.4 |
fj@4.12.0 |
|
pfapack |
2014-09-17 |
fj@4.12.0 |
|
phase0 |
2024.01 |
fj@4.12.0 |
type=2d |
phase0 |
2024.01 |
fj@4.12.0 |
type=3d |
picard |
3.3.0 |
||
plumed |
2.9.0 |
fj@4.12.0 |
|
povray |
3.7.0.10 |
fj@4.12.0 |
|
py-ase |
3.23.0 |
||
py-cftime |
1.6.4 |
fj@4.12.0 |
|
py-dask |
2024.7.1 |
||
py-h5py |
3.13.0 |
fj@4.12.0 |
|
py-hypothesis |
6.96.2 |
||
py-ipykernel |
6.29.5 |
||
py-matplotlib |
3.10.3 |
fj@4.12.0 |
|
py-mpi4py |
4.0.1 |
fj@4.12.0 |
|
py-netcdf4 |
1.7.2 |
fj@4.12.0 |
|
py-numpy |
1.26.4 |
fj@4.12.0 |
|
py-numpy |
2.2.6 |
fj@4.12.0 |
|
py-pandas |
2.3.1 |
fj@4.12.0 |
|
py-pip |
25.1.1 |
||
py-pyarrow |
16.1.0 |
fj@4.12.0 |
|
py-pydmd |
0.3 |
||
py-pygps |
1.3.5 |
||
py-pymol |
2.5.0 |
fj@4.12.0 |
|
py-pysam |
0.21.0 |
fj@4.12.0 |
|
py-pytest |
8.2.1 |
||
py-pytoml |
0.1.21 |
||
py-scikit-learn |
1.7.0 |
fj@4.12.0 |
|
py-scipy |
1.8.1 |
fj@4.12.0 |
|
py-seaborn |
0.13.2 |
||
py-spglib |
2.0.2 |
fj@4.12.0 |
|
py-toml |
0.10.2 |
||
py-xarray |
2024.7.0 |
||
python |
3.13.5 |
fj@4.12.0 |
|
qt |
5.15.16 |
fj@4.12.0 |
|
quantum-espresso |
7.3.1 |
fj@4.12.0 |
|
quantum-espresso |
7.4.1 |
fj@4.12.0 |
|
raja |
2025.03.0 |
fj@4.12.0 |
|
rist-fftw |
3.3.9-272-g63d6bd70 |
||
rust |
1.85.0 |
fj@4.12.0 |
|
salmon-tddft |
2.2.1 |
fj@4.12.0 |
|
samtools |
1.19.2 |
fj@4.12.0 |
|
screen |
4.9.1 |
fj@4.12.0 |
|
smash |
3.0.2 |
fj@4.12.0 |
|
spglib |
2.5.0 |
fj@4.12.0 |
|
star |
2.7.11b |
fj@4.12.0 |
|
suite-sparse |
7.8.3 |
fj@4.12.0 |
|
tmux |
3.5a |
fj@4.12.0 |
|
zpares |
0.9.6a |
fj@4.12.0 |